Package index • ecositer

All functions

QC_aggregate_abundance(): Aggregate abundance columns

QC_best_vegplot_for_site(): Keep best vegplot when multiple exist for site

QC_completeness_criteria(): Remove vegetation plots based on completeness criteria

QC_find_multiple_abundance(): Find vegetation records with multiple abundances

QC_location_data(): QC site location data

QC_unify_taxa(): QC taxonomies for unifying

QC_update_taxonomy(): Update taxonomy according to USDA PLANTS

QC_veg_completeness(): Summarize vegetation plot completeness

big_beta_diversity(): Big beta diversity

create_local_veg_db(): Create local vegetation database

create_veg_df(): Create vegetation dataframe from multiple possible locations

ecosite_similarity_pairwise(): Ecosite similarity list

hello(): Hello, World!

nmds_ecosite(): Run NMDS on vegetation data

nmds_plot(): NMDS plot

nmds_taxa(): Run NMDS for taxa of interest

nmds_taxon_comparison(): NMDS taxon comparison

number_plots_by_site(): Number of plots by ecosite

pres_abs_conversion(): Convert normal abundance data to presence/absence

site_level_soil_properties(): Create site level properties from soil horizon data

site_similarity_pairwise(): Distance matrix to pairwise distance dataframe

site_soils(): Site level soil properties

sites_in_state_phase(): Identify siteid(s)/vegplotid(s) in states/phases of STMs

species_list(): Species list

strange_bedfellows(): Strange bedfellows

summarize_pedon_soil_properties(): Summarize pedon soil properties

summarize_veg_by_ecosite(): Summarize vegetation data by ecosite, state, and community phase

veg_summary(): Produce vegetation summary of ecosites and states/phases

veg_summary2(): Produce vegetation summary of ecosites and states/phases

veg_summary_taxa(): Vegetation summary for particular taxa