Package index
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QC_aggregate_abundance() - Aggregate abundance columns
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QC_best_vegplot_for_site() - Keep best vegplot when multiple exist for site
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QC_completeness_criteria() - Remove vegetation plots based on completeness criteria
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QC_find_multiple_abundance() - Find vegetation records with multiple abundances
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QC_location_data() - QC site location data
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QC_unify_taxa() - QC taxonomies for unifying
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QC_update_taxonomy() - Update taxonomy according to USDA PLANTS
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QC_veg_completeness() - Summarize vegetation plot completeness
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SEKI_NP_Veg - Example data set from the Sequoia and King's Canyon National Parks Soil Survey conducted by the Natural Resources Conservation Service (Soil Survey Area 792). All data is obtained from the National Soils Information System (NASIS) database.
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big_beta_diversity() - Big beta diversity
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create_local_veg_db() - Create local vegetation database
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create_veg_df() - Create vegetation dataframe from multiple possible locations
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ecosite_similarity_pairwise() - Ecosite similarity list
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hello() - Hello, World!
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nmds_ecosite() - Run NMDS on vegetation data
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nmds_plot() - NMDS plot
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nmds_taxa() - Run NMDS for taxa of interest
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nmds_taxon_comparison() - NMDS taxon comparison
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number_plots_by_site() - Number of plots by ecosite
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pres_abs_conversion() - Convert normal abundance data to presence/absence
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site_level_soil_properties() - Create site level properties from soil horizon data
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site_similarity_pairwise() - Distance matrix to pairwise distance dataframe
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site_soils() - Site level soil properties
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sites_in_state_phase() - Identify siteid(s)/vegplotid(s) in states/phases of STMs
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species_list() - Species list
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strange_bedfellows() - Strange bedfellows
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summarize_pedon_soil_properties() - Summarize pedon soil properties
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summarize_veg_by_ecosite() - Summarize vegetation data by ecosite, state, and community phase
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veg_summary() - Produce vegetation summary of ecosites and states/phases
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veg_summary2() - Produce vegetation summary of ecosites and states/phases
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veg_summary_taxa() - Vegetation summary for particular taxa