This function is intended to provide a quick visualization of sites containing
a taxa of interest. It is intended to be used in assessing whether taxa can
be combined. For example, an ordination showing strong overlap in vegetative
communities between sites with "Arenaria" and "Arenaria kingii" might suggest
that these two taxa can be combined.
Usage
nmds_taxa(veg_df, taxa, reference_taxa = NULL, spp.scr.thrshld = 0.01)
Arguments
- veg_df
properly formatted vegetation dataframe
- taxa
taxa of interested (e.g., "Arenaria")
- reference_taxa
additional taxa used to compare spread in ordination space
- spp.scr.thrshld
p-value threshold for species scores being displayed
Value
an ordination of plots in species space of all plots that contain the taxa of interest